Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887726.1_cds_XP_016442222.1_37508
CDS Infomation

[gene=LOC107767659] [db_xref=GeneID:107767659] [protein=glucan endo-1,3-beta-glucosidase 12-like] [protein_id=XP_016442222.1] [location=complement(join(308186..308217,308506..309865))] [gbkey=CDS]
Sequence

ATGTCTCTCCTTTGTAGTACTATTGTTTTCCCACTCCTCATTCTCCTCCTGCTTAGCCCT
GTTAACGGCGTGGGCATAAACTATGGGACAATTGGAAGCAATTTGCCCTCACCAAAGAAA
GTGGCTCAGCTACTTCAGTCCACCATCATTGACAAGGTTAAGATTTATGATACCAACCCC
CAAATCCTTGAAGCCTTTTCCAACACTGGCATTGACCTCATTGTTGCTGTAGAAAACTCC
CATGTTGCAAACTTAAGCGCCGTCCAATCTGCTGCTGACGAGTGGTTCGCCGCTCGTATC
TTGCCCTTCATTCCTGCCACTTCCATTGTCGCCATTGCAGTTGGAAATGAGTACTTAACC
ACTGATAATGATGATGATAAATTAGACCATAATGCCTTAGTCCAAGCTATGCAAAATCTG
CATTCAGTTTTACTAGCACGCGGGCTAGACCGAAAAATCAAAGTGTCTACGCCACATAGC
ATGGCTGTTCTTGCTTCTTCATTTCCACCTTCATCTTCCACATTTGCCACCACTCTCCTT
CCTATTATGACTTCCATTGTCGGGTTTTTGGCAGATACCGGTGCTCCATTCATGGTTAAT
GCGTACCCATATTTTGCATATCGGGACAATCCCGGTATGGTCAATTTAGAGTACGCATTA
CTAGGAAATGCAACCGGGGTACGTGACCCTAAAGGTTACGTGTACACCAACATGTTAGAT
GCACAAATTGATGCAATTAGATCAGCAGTGAATGCACTCGGTTTTGGAAACCGAACAATT
AAGATTATGGTGTCTGAATCTGGATGGCCGTCTAAAGGAGATAAAGGAGAAACCGCTGCA
ACCACTGATAATGCTAGGACTTATAATACACGATTAGTTGAACGTGCTCAGTCAAATAAA
GGCACCCCAATGAGCCCAAAAAATAGCATTGATATTTTTGTCTTTGCATTATTCAACGAA
AATAAGAAACAAGGAGGAACAAGTGAGAGGAATTTTGGGATTTTCAATGGTGATGGATCA
AAGGTTTATGATGTGGATTTGAGTTGTCAATTCTGCAGCAGCAATACAAATGACAAAACA
GGTTTTAGTTTTGGCGAAAAAGCATCGTTAAGGGGACCTTCAGTTTGGTGTGTGGCTAAA
CCACATGCAGATGAGAAGGTAATACAAGCAGTGTTGGATTTTTGTTGTGGACCTGGTGGT
GTGGATTGTAGAGAAATTTATGAAAATGGGGATTGTTTTCAACCTGATAAAATTCATGCT
CATGCTTCTTACGCGATGAACGCTTATTACCAGATGCATGGAAGGAATTACTGGAATTGT
GACTTCAAAGGAACTGGCCTCGTTACCTTCAGTGATCCAAGTTATGGAAGATGTTTCTAT
TCACAGCAGTGA

Peptide Sequence

PEP ID

XP_016442222.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Nicotiana tabacum]
Sequence

MSLLCSTIVFPLLILLLLSPVNGVGINYGTIGSNLPSPKKVAQLLQSTIIDKVKIYDTNP
QILEAFSNTGIDLIVAVENSHVANLSAVQSAADEWFAARILPFIPATSIVAIAVGNEYLT
TDNDDDKLDHNALVQAMQNLHSVLLARGLDRKIKVSTPHSMAVLASSFPPSSSTFATTLL
PIMTSIVGFLADTGAPFMVNAYPYFAYRDNPGMVNLEYALLGNATGVRDPKGYVYTNMLD
AQIDAIRSAVNALGFGNRTIKIMVSESGWPSKGDKGETAATTDNARTYNTRLVERAQSNK
GTPMSPKNSIDIFVFALFNENKKQGGTSERNFGIFNGDGSKVYDVDLSCQFCSSNTNDKT
GFSFGEKASLRGPSVWCVAKPHADEKVIQAVLDFCCGPGGVDCREIYENGDCFQPDKIHA
HASYAMNAYYQMHGRNYWNCDFKGTGLVTFSDPSYGRCFYSQQ

Transcript Sequence

Gene sequence data has not been registered.